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Disease resistance protein (CC-NBS-LRR class) family [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842226, updated on 18-Sep-2024

Summary

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Official Full Name
Disease resistance protein (CC-NBS-LRR class) family
Primary source
TAIR:AT1G58848
Locus tag
AT1G58848
See related
Araport:AT1G58848
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 1
Exon count:
7
Sequence:
Chromosome: 1; NC_003070.9 (21791688..21797050)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Disease resistance protein (CC-NBS-LRR class) family Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene Inositol-pentakisphosphate 2-kinase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_001036130.2
NM_148606.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ADP binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Disease resistance protein (CC-NBS-LRR class) family
NP_001031207.1
  • Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G59218.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_683447.2
  • Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G59218.2); Has 17671 Blast hits to 15071 proteins in 568 species: Archae - 4; Bacteria - 896; Metazoa - 587; Fungi - 110; Plants - 15906; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    21791688..21797050
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_148606.3 → NP_683447.2  Disease resistance protein (CC-NBS-LRR class) family [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_683447.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P0DI17, P0DI18, Q94HW3, Q94HW8, Q9SLU7, Q9SLU8
    UniProtKB/TrEMBL
    A0A5S9WSE0
    Conserved Domains (4) summary
    COG4886
    Location:587 → 721
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    cd14798
    Location:6 → 124
    RX-CC_like; Coiled-coil domain of the potato virux X resistance protein and similar proteins
    sd00033
    Location:612 → 634
    LRR_RI; leucine-rich repeat [structural motif]
    pfam00931
    Location:166 → 459
    NB-ARC; NB-ARC domain

  2. NM_001036130.2 → NP_001031207.1  Disease resistance protein (CC-NBS-LRR class) family [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031207.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P0DI17, P0DI18, Q94HW3, Q94HW8, Q9SLU7, Q9SLU8
    UniProtKB/TrEMBL
    A0A5S9WSE0
    Conserved Domains (4) summary
    COG4886
    Location:587 → 721
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    cd14798
    Location:6 → 124
    RX-CC_like; Coiled-coil domain of the potato virux X resistance protein and similar proteins
    sd00033
    Location:612 → 634
    LRR_RI; leucine-rich repeat [structural motif]
    pfam00931
    Location:166 → 459
    NB-ARC; NB-ARC domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P0DI17.1
P0DI18.1

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