U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SAUR-like auxin-responsive protein family [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842068, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
SAUR-like auxin-responsive protein family
Primary source
TAIR:AT1G56150
Locus tag
AT1G56150
See related
Araport:AT1G56150
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F14G9.23; SAUR71; SMALL AUXIN UPREGULATED 71
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_003070.9 (21017311..21018122)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Leucine-rich repeat transmembrane protein kinase Neighboring gene Leucine-rich repeat transmembrane protein kinase Neighboring gene ncRNA Neighboring gene myb domain protein 72 Neighboring gene ATP-dependent zinc metalloprotease Neighboring gene nuclear factor Y, subunit C2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The tissue-specific and developmentally regulated expression patterns of the SAUR41 subfamily of small auxin up RNA genes: potential implications. Qiu T, et al. Plant Signal Behav, 2013 Aug. PMID 23759547, Free PMC Article
  2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

NM_104494.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
SAUR-like auxin-responsive protein family
NP_176011.1
  • SAUR-like auxin-responsive protein family; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT3G12830.1); Has 1156 Blast hits to 1154 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1155; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    21017311..21018122
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_104494.3 → NP_176011.1  SAUR-like auxin-responsive protein family [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_176011.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SGU2
    UniProtKB/TrEMBL
    A0A178WDA4, A0A5S9WQ43, A0A654EKN5
    Conserved Domains (1) summary
    pfam02519
    Location:1 → 98
    Auxin_inducible; Auxin responsive protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SGU2.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools