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CAX5 cation exchanger 5 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842022, updated on 18-Sep-2024

Summary

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Official Symbol
CAX5
Official Full Name
cation exchanger 5
Primary source
TAIR:AT1G55730
Locus tag
AT1G55730
See related
Araport:AT1G55730
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATCAX5; cation exchanger 5; F20N2.30; F20N2_30
Summary
member of Low affinity calcium antiporter CAX2 family
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Genomic context

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See CAX5 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
13
Sequence:
Chromosome: 1; NC_003070.9 (20831031..20834628, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene vacuolar cation/proton exchanger Neighboring gene seed imbibition 1 Neighboring gene BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Uncovering Arabidopsis membrane protein interactome enriched in transporters using mating-based split ubiquitin assays and classification models. Chen J, et al. Front Plant Sci, 2012. PMID 22737156, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001036119.2
NM_104449.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables calcium:monoatomic cation antiporter activity ISS
Inferred from Sequence or Structural Similarity
more info
  

General protein information

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Preferred Names
cation exchanger 5
NP_001031196.1
  • cation exchanger 5 (CAX5); FUNCTIONS IN: cation:cation antiporter activity, calcium:cation antiporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837), Calcium/proton exchanger superfamily (InterPro:IPR004798), Calcium/proton exchanger (InterPro:IPR004713); BEST Arabidopsis thaliana protein match is: cation exchanger 2 (TAIR:AT3G13320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_175969.2
  • cation exchanger 5 (CAX5); FUNCTIONS IN: cation:cation antiporter activity, calcium:cation antiporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837), Calcium/proton exchanger superfamily (InterPro:IPR004798), Calcium/proton exchanger (InterPro:IPR004713); BEST Arabidopsis thaliana protein match is: cation exchanger 2 (TAIR:AT3G13320.1); Has 3072 Blast hits to 2900 proteins in 927 species: Archae - 39; Bacteria - 1714; Metazoa - 14; Fungi - 740; Plants - 249; Viruses - 0; Other Eukaryotes - 316 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    20831031..20834628 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001036119.2 → NP_001031196.1  cation exchanger 5 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031196.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8L783, Q9LFZ7
    UniProtKB/TrEMBL
    A0A178W8W5, B9DHD0
    Conserved Domains (2) summary
    TIGR00846
    Location:71 → 431
    caca2; calcium/proton exchanger
    pfam01699
    Location:288 → 432
    Na_Ca_ex; Sodium/calcium exchanger protein

  2. NM_104449.3 → NP_175969.2  cation exchanger 5 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_175969.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8L783, Q9LFZ7
    UniProtKB/TrEMBL
    A0A178W8W5, B9DHD0
    Conserved Domains (2) summary
    TIGR00846
    Location:71 → 431
    caca2; calcium/proton exchanger
    pfam01699
    Location:288 → 432
    Na_Ca_ex; Sodium/calcium exchanger protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8L783.1

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