U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Major facilitator superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841914, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
Major facilitator superfamily protein
Primary source
TAIR:AT1G54730
Locus tag
AT1G54730
See related
Araport:AT1G54730
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T22H22.15; T22H22_15
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 1
Exon count:
17
Sequence:
Chromosome: 1; NC_003070.9 (20424332..20430194)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene autophagy 18h-like protein Neighboring gene ncRNA Neighboring gene early-responsive to dehydration protein-related / ERD protein-like protein Neighboring gene FANTASTIC four-like protein (DUF3049) Neighboring gene pseudo

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

NM_001333665.1
NM_001333666.1
NM_001333667.1
NM_001333669.1
NM_001333670.1
NM_001333671.1
NM_001333672.1
NM_001333673.1
NM_104349.2
NM_180633.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables carbohydrate transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables sugar transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
Major facilitator superfamily protein
NP_001319233.1
  • Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G48020.1); Has 23568 Blast hits to 23366 proteins in 1753 species: Archae - 455; Bacteria - 9572; Metazoa - 4390; Fungi - 6076; Plants - 2075; Viruses - 0; Other Eukaryotes - 1000 (source: NCBI BLink).
NP_564666.1
  • Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G08930.2); Has 386 Blast hits to 385 proteins in 60 species: Archae - 0; Bacteria - 8; Metazoa - 50; Fungi - 28; Plants - 299; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
NP_850964.1
  • Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G18840.1); Has 30738 Blast hits to 30251 proteins in 2131 species: Archae - 585; Bacteria - 14306; Metazoa - 5298; Fungi - 6561; Plants - 2647; Viruses - 0; Other Eukaryotes - 1341 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    20424332..20430194
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001333668.1 → NP_001323199.1  Major facilitator superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AWE2, A0A7G2DY22

  2. NM_001333667.1 → NP_001319233.1  Major facilitator superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A2H1ZED1, A0A7G2E0X5

  3. NM_001333669.1 → NP_001323200.1  Major facilitator superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AWE3, A0A7G2DY22

  4. NM_180633.2 → NP_850964.1  Major facilitator superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_850964.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q3ECP7, Q8H197, Q940K3, Q9ZVM0
    UniProtKB/TrEMBL
    A0A5S9WPQ5, A0A654EJX8, A0A7G2E0X5
    Conserved Domains (1) summary
    cd17358
    Location:37 → 460
    MFS_GLUT6_8_Class3_like; Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily

  5. NM_001333670.1 → NP_001323198.1  Major facilitator superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WNC8, A0A1P8AWA4, A0A384LEZ5
    Conserved Domains (1) summary
    cl28910
    Location:37 → 313
    MFS; Major Facilitator Superfamily

  6. NM_001333671.1 → NP_001323197.1  Major facilitator superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AWE1

  7. NM_001333673.1 → NP_001323195.1  Major facilitator superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AWE1

  8. NM_001333672.1 → NP_001323196.1  Major facilitator superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AWA9

  9. NM_001333665.1 → NP_001323201.1  Major facilitator superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WNC8, A0A1P8AWA4, A0A384LEZ5
    Conserved Domains (1) summary
    cl28910
    Location:37 → 313
    MFS; Major Facilitator Superfamily

  10. NM_001333666.1 → NP_001323194.1  Major facilitator superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WPK5, A0A1P8AWG7, A0A384LAL3

  11. NM_104349.2 → NP_564666.1  Major facilitator superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564666.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q3ECP7
    Conserved Domains (1) summary
    TIGR00879
    Location:1 → 61
    SP; MFS transporter, sugar porter (SP) family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q3ECP7.2

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.