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TPX2 (targeting protein for Xklp2) protein family [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841888, updated on 18-Sep-2024

Summary

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Official Full Name
TPX2 (targeting protein for Xklp2) protein family
Primary source
TAIR:AT1G54460
Locus tag
AT1G54460
See related
Araport:AT1G54460
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F20D21.28; F20D21_28
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Genomic context

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Location:
chromosome: 1
Exon count:
7
Sequence:
Chromosome: 1; NC_003070.9 (20340572..20343554, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Protein of unknown function (PD694200) Neighboring gene Calcium-binding EF-hand family protein Neighboring gene resistance to peronospora parasitica protein Neighboring gene LRR receptor-like Serine/Threonine-kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_104324.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in microtubule cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
TPX2 (targeting protein for Xklp2) protein family
NP_564659.1
  • TPX2 (targeting protein for Xklp2) protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: WVD2-like 1 (TAIR:AT3G04630.3); Has 583 Blast hits to 565 proteins in 94 species: Archae - 0; Bacteria - 3; Metazoa - 163; Fungi - 46; Plants - 315; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    20340572..20343554 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_104324.4 → NP_564659.1  TPX2 (targeting protein for Xklp2) protein family [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564659.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8LES4, Q9ASW8, Q9SLI7
    UniProtKB/TrEMBL
    A0A178W9C2, A0A5S9WPW6, A0A654EIX9
    Conserved Domains (1) summary
    pfam06886
    Location:165 → 249
    TPX2; Targeting protein for Xklp2 (TPX2)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9ASW8.1

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