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EXO70D2 exocyst subunit exo70 family protein D2 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841847, updated on 18-Sep-2024

Summary

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Official Symbol
EXO70D2
Official Full Name
exocyst subunit exo70 family protein D2
Primary source
TAIR:AT1G54090
Locus tag
AT1G54090
See related
Araport:AT1G54090
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATEXO70D2; exocyst subunit exo70 family protein D2; F15I1.17; F15I1_17
Summary
A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.
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Genomic context

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See EXO70D2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_003070.9 (20189472..20191900)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Dormancy/auxin associated family protein Neighboring gene oligouridylate-binding protein 1A Neighboring gene DUF1677 family protein, putative (DUF1677) Neighboring gene aldehyde dehydrogenase 7B4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. EXPO, an exocyst-positive organelle distinct from multivesicular endosomes and autophagosomes, mediates cytosol to cell wall exocytosis in Arabidopsis and tobacco cells. Wang J, et al. Plant Cell, 2010 Dec. PMID 21193573, Free PMC Article
  2. Characterization of the Arabidopsis thaliana exocyst complex gene families by phylogenetic, expression profiling, and subcellular localization studies. Chong YT, et al. New Phytol, 2010 Jan. PMID 19895414
  3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_104286.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables phosphatidylinositol-4,5-bisphosphate binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 
part_of exocyst IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
exocyst subunit exo70 family protein D2
NP_175811.1
  • exocyst subunit exo70 family protein D2 (EXO70D2); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, nucleus, exocyst; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein D3 (TAIR:AT3G14090.1); Has 901 Blast hits to 890 proteins in 129 species: Archae - 2; Bacteria - 4; Metazoa - 138; Fungi - 84; Plants - 651; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    20189472..20191900
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_104286.3 → NP_175811.1  exocyst subunit exo70 family protein D2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_175811.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WKC9, A0A5S9WPU1, Q9SYG5
    Conserved Domains (1) summary
    pfam03081
    Location:239 → 607
    Exo70; Exo70 exocyst complex subunit
Nucleotide Protein
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