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LURP-one-like protein (DUF567) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841827, updated on 18-Sep-2024

Summary

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Official Full Name
LURP-one-like protein (DUF567)
Primary source
TAIR:AT1G53890
Locus tag
AT1G53890
See related
Araport:AT1G53890
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T18A20.12
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Genomic context

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Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_003070.9 (20124706..20126525)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene linoleate 9S-lipoxygenase-4 protein, putative (DUF581) Neighboring gene uncharacterized protein Neighboring gene Eukaryotic translation initiation factor 2B (eIF-2B) family protein Neighboring gene linoleate 9S-lipoxygenase-4 protein, putative (DUF581)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_001036107.3
NM_001198289.1
NM_001333617.1
NM_001333618.1
NM_104267.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
LURP-one-like protein (DUF567)
NP_001031184.1
  • Protein of unknown function (DUF567); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT1G53870.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_001185218.2
  • Protein of unknown function (DUF567); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT1G53870.2).
NP_001319217.1
  • Protein of unknown function (DUF567); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT1G53870.1); Has 264 Blast hits to 263 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 264; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    20124706..20126525
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001036107.3 → NP_001031184.1  LURP-one-like protein (DUF567) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031184.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W592
    Conserved Domains (1) summary
    pfam04525
    Location:30 → 194
    LOR; LURP-one-related

  2. NM_104267.2 → NP_564645.1  LURP-one-like protein (DUF567) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564645.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q67XV7, Q682D7, Q682U5, Q8LG32, Q9S7P7
    UniProtKB/TrEMBL
    A0A178W592
    Conserved Domains (1) summary
    pfam04525
    Location:30 → 209
    LOR; LURP-one-related

  3. NM_001333617.1 → NP_001319217.1  LURP-one-like protein (DUF567) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q67XV7, Q682D7, Q682U5, Q8LG32, Q9S7P7
    UniProtKB/TrEMBL
    A0A178W592

  4. NM_001333618.1 → NP_001320314.1  LURP-one-like protein (DUF567) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W592

  5. NM_001198289.1 → NP_001185218.2  LURP-one-like protein (DUF567) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W592, F4HTE5
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q67XV7.2
Q8LG32.2

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