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WAG1 WAG 1 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841807, updated on 18-Sep-2024

Summary

Official Symbol
WAG1
Official Full Name
WAG 1
Primary source
TAIR:AT1G53700
Locus tag
AT1G53700
See related
Araport:AT1G53700
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F22G10.21; F22G10_21; PK3AT; PROTEIN KINASE 3 ARABIDOPSIS THALIANA; WAG 1
Summary
The WAG1 and its homolog, WAG2 each encodes a protein-serine/threonine kinase that are nearly 70% identical to PsPK3 protein. All three together with CsPK3 belong to PsPK3-type kinases. At the N-terminus, all four possess a serine/threonine-rich domain. They are closely related to Arabidopsis kinases PINOID. wag1/wag2 double mutants exhibit a pronounced wavy root phenotype when grown vertically on agar plates (while wild-type plants develop wavy roots only on plates inclined to angles less than 90 degrees), indicating an overlapping role for WAG1 and WAG2 as suppressors of root waving. Simultaneous disruption of PID(AT2G34650) and its 3 closest homologs (PID2/AT2G26700, WAG1/AT1G53700, and WAG2/AT3G14370) abolishes the formation of cotyledons.
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Genomic context

See WAG1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_003070.9 (20048434..20050294)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene DNA directed RNA polymerase, 7 kDa subunit Neighboring gene putative aminoacyl-tRNA ligase Neighboring gene ncRNA Neighboring gene ROTUNDIFOLIA like 9

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

NM_104248.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
enables protein serine/threonine kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within auxin polar transport IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within cotyledon development IGI
Inferred from Genetic Interaction
more info
PubMed 
NOT involved_in gravitropism IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within root development IGI
Inferred from Genetic Interaction
more info
PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
WAG 1
NP_175774.1
  • WAG 1 (WAG1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G14370.1); Has 97126 Blast hits to 96120 proteins in 2766 species: Archae - 63; Bacteria - 12090; Metazoa - 36361; Fungi - 11348; Plants - 19901; Viruses - 394; Other Eukaryotes - 16969 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    20048434..20050294
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_104248.4NP_175774.1  WAG 1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_175774.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O81661, Q9C8M5
    UniProtKB/TrEMBL
    A0A178W0E4, A0A5S9WLP1
    Conserved Domains (1) summary
    cd05574
    Location:91416
    STKc_phototropin_like; Catalytic domain of Phototropin-like Serine/Threonine Kinases