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alpha/beta-Hydrolases superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841678, updated on 18-Sep-2024

Summary

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Official Full Name
alpha/beta-Hydrolases superfamily protein
Primary source
TAIR:AT1G52470
Locus tag
AT1G52470
See related
Araport:AT1G52470
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F6D8.31; F6D8_31
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Genomic context

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Location:
chromosome: 1
Exon count:
9
Sequence:
Chromosome: 1; NC_003070.9 (19553213..19555543)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Ubiquitin carboxyl-terminal hydrolase-related protein Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene F-box/associated interaction domain protein Neighboring gene F-box/associated interaction domain protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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NM_001124002.1
NM_001124003.1
NM_104125.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
alpha/beta-Hydrolases superfamily protein
NP_001117474.1
  • alpha/beta-Hydrolases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G52460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_001117475.1
  • alpha/beta-Hydrolases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G52460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_175656.2
  • alpha/beta-Hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G52460.1); Has 115 Blast hits to 115 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 108; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    19553213..19555543
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001124002.1 → NP_001117474.1  alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001117474.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B3H483

  2. NM_001124003.1 → NP_001117475.1  alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001117475.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B3H753

  3. NM_104125.3 → NP_175656.2  alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_175656.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654EJ99, Q9SSQ1
    Conserved Domains (1) summary
    cl21494
    Location:15 → 222
    Abhydrolase; alpha/beta hydrolases
Nucleotide Protein
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