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IQD27 IQ-domain 27 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841624, updated on 18-Sep-2024

Summary

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Official Symbol
IQD27
Official Full Name
IQ-domain 27
Primary source
TAIR:AT1G51960
Locus tag
AT1G51960
See related
Araport:AT1G51960
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
IQ-domain 27; T14L22.17
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Genomic context

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See IQD27 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_003070.9 (19310174..19311683)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene indole-3-acetic acid inducible 18 Neighboring gene ABA Overly-Sensitive 5 Neighboring gene B3 domain protein Neighboring gene Insulinase (Peptidase family M16) protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_104077.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
IQ-domain 27
NP_175608.1
  • IQ-domain 27 (IQD27); CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 26 (TAIR:AT3G16490.1); Has 770 Blast hits to 761 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 5; Plants - 754; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    19310174..19311683
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_104077.2 → NP_175608.1  IQ-domain 27 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_175608.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9ZU28
    UniProtKB/TrEMBL
    A0A654EJ55
    Conserved Domains (2) summary
    pfam13178
    Location:253 → 318
    DUF4005; Protein of unknown function (DUF4005)
    cd22307
    Location:85 → 121
    Adgb_C_mid-like; C-terminal middle region of Androglobins (Adgbs) and related proteins; including permuted globin domain and IQ motif
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9ZU28.1

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