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ILL5 IAA-amino acid hydrolase ILR1-like 5 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841604, updated on 18-Sep-2024

Summary

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Official Symbol
ILL5
Official Full Name
IAA-amino acid hydrolase ILR1-like 5
Primary source
TAIR:AT1G51780
Locus tag
AT1G51780
See related
Araport:AT1G51780
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F19C24.29; F19C24_29; IAA-leucine resistant (ILR)-like gene 5
Summary
encodes a member of the six Arabidopsis IAA-amino acid conjugate hydrolase subfamily and conjugates and is very similar to IAR3.
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Genomic context

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See ILL5 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
5
Sequence:
Chromosome: 1; NC_003070.9 (19204512..19206586)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene peptidase M20/M25/M40 family protein Neighboring gene Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein Neighboring gene Leucine-rich repeat protein kinase family protein Neighboring gene Leucine-rich repeat protein kinase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. IAR3 encodes an auxin conjugate hydrolase from Arabidopsis. Davies RT, et al. Plant Cell, 1999 Mar. PMID 10072397, Free PMC Article
  2. Arabidopsis auxin mutants are compromised in systemic acquired resistance and exhibit aberrant accumulation of various indolic compounds. Truman WM, et al. Plant Physiol, 2010 Mar. PMID 20081042, Free PMC Article
  3. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
  4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables IAA-amino acid conjugate hydrolase activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
involved_in auxin metabolic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within regulation of systemic acquired resistance IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in nucleus HDA PubMed 

General protein information

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Preferred Names
IAA-amino acid hydrolase ILR1-like 5
NP_175589.1
  • IAA-leucine resistant (ILR)-like gene 5 (ILL5); FUNCTIONS IN: metallopeptidase activity, IAA-amino acid conjugate hydrolase activity; INVOLVED IN: proteolysis, regulation of systemic acquired resistance; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20, dimerisation (InterPro:IPR011650), Peptidase M20D, amidohydrolase (InterPro:IPR010168), Peptidase M20D, mername-AA028/carboxypeptidase Ss1 (InterPro:IPR017439); BEST Arabidopsis thaliana protein match is: peptidase M20/M25/M40 family protein (TAIR:AT1G51760.1); Has 13227 Blast hits to 13219 proteins in 2009 species: Archae - 135; Bacteria - 9794; Metazoa - 77; Fungi - 235; Plants - 313; Viruses - 0; Other Eukaryotes - 2673 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    19204512..19206586
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_104057.1 → NP_175589.1  IAA-amino acid hydrolase ILR1-like 5 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_175589.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SWX9
    UniProtKB/TrEMBL
    A0A7G2DZY7
    Conserved Domains (2) summary
    PLN02693
    Location:1 → 428
    PLN02693; IAA-amino acid hydrolase
    cd08017
    Location:48 → 423
    M20_IAA_Hyd; M20 Peptidase Indole-3-acetic acid amino acid hydrolase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SWX9.1

Gene LinkOut

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