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Cation efflux family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841586, updated on 18-Sep-2024

Summary

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Official Full Name
Cation efflux family protein
Primary source
TAIR:AT1G51610
Locus tag
AT1G51610
See related
Araport:AT1G51610
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F19C24.16
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Genomic context

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Location:
chromosome: 1
Exon count:
13
Sequence:
Chromosome: 1; NC_003070.9 (19136214..19139989)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene alpha-mannosidase 1 Neighboring gene ncRNA Neighboring gene ZIM-LIKE 2 Neighboring gene Protein kinase superfamily protein Neighboring gene O-fucosyltransferase family protein Neighboring gene ncRNA Neighboring gene exocyst subunit exo70 family protein G2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic relationships within cation transporter families of Arabidopsis. Mäser P, et al. Plant Physiol, 2001 Aug. PMID 11500563, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_104039.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables efflux transmembrane transporter activity NAS
Non-traceable Author Statement
more info
 PubMed 
enables monoatomic cation transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within transmembrane transport NAS
Non-traceable Author Statement
more info
 PubMed 
involved_in zinc ion transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Cation efflux family protein
NP_564594.1
  • Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity, efflux transmembrane transporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); Has 3094 Blast hits to 3092 proteins in 1095 species: Archae - 127; Bacteria - 2543; Metazoa - 129; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 250 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    19136214..19139989
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_104039.4 → NP_564594.1  Cation efflux family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564594.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8H1G3, Q949W1, Q9C531
    UniProtKB/TrEMBL
    A0A178WIV9, A0A5S9WL17
    Conserved Domains (1) summary
    cl30791
    Location:107 → 381
    FieF; Divalent metal cation (Fe/Co/Zn/Cd) transporter [Inorganic ion transport and metabolism]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8H1G3.1

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