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pfkB-like carbohydrate kinase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841461, updated on 18-Sep-2024

Summary

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Official Full Name
pfkB-like carbohydrate kinase family protein
Primary source
TAIR:AT1G50390
Locus tag
AT1G50390
See related
Araport:AT1G50390
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F14I3.3; F14I3_3
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Genomic context

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Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_003070.9 (18666986..18667677, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Calcineurin-like metallo-phosphoesterase superfamily protein Neighboring gene Prolyl oligopeptidase family protein Neighboring gene Eukaryotic porin family protein Neighboring gene SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
pfkB-like carbohydrate kinase family protein
NP_175456.1
  • pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); BEST Arabidopsis thaliana protein match is: pfkB-like carbohydrate kinase family protein (TAIR:AT1G06030.1); Has 7594 Blast hits to 7591 proteins in 1676 species: Archae - 131; Bacteria - 6008; Metazoa - 26; Fungi - 77; Plants - 323; Viruses - 0; Other Eukaryotes - 1029 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    18666986..18667677 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_103922.1 → NP_175456.1  pfkB-like carbohydrate kinase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_175456.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9WNN7
    Conserved Domains (1) summary
    cl00192
    Location:1 → 145
    ribokinase_pfkB_like; ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group. The superfamily includes ribokinase, fructokinase, ketohexokinase, ...
Nucleotide Protein
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