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glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841407, updated on 18-Sep-2024

Summary

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Official Full Name
glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620)
Primary source
TAIR:AT1G49840
Locus tag
AT1G49840
See related
Araport:AT1G49840
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F10F5.2; F10F5_2
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Genomic context

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Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_003070.9 (18451746..18454463)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene S-methyl-5-thioribose kinase Neighboring gene basic helix-loop-helix (bHLH) DNA-binding superfamily protein Neighboring gene ncRNA Neighboring gene RING/U-box superfamily protein Neighboring gene glutathione S-transferase (class phi) 14

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_103871.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620)
NP_175406.1
  • Protein of unknown function (DUF620); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF620 (InterPro:IPR006873); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF620) (TAIR:AT3G19540.1); Has 212 Blast hits to 211 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 212; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    18451746..18454463
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_103871.4 → NP_175406.1  glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_175406.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WMU0, A0A5S9WKG0, Q9C6D0
    Conserved Domains (1) summary
    pfam04788
    Location:199 → 439
    DUF620; Protein of unknown function (DUF620)
Nucleotide Protein
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