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Calcium-dependent protein kinase (CDPK) family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841382, updated on 18-Sep-2024

Summary

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Official Full Name
Calcium-dependent protein kinase (CDPK) family protein
Primary source
TAIR:AT1G49580
Locus tag
AT1G49580
See related
Araport:AT1G49580
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F14J22.18; F14J22_18
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Genomic context

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Location:
chromosome: 1
Exon count:
11
Sequence:
Chromosome: 1; NC_003070.9 (18351324..18354634)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Homeodomain-like superfamily protein Neighboring gene Peroxidase superfamily protein Neighboring gene C2H2 and C2HC zinc fingers superfamily protein Neighboring gene RNA-binding protein 47A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Members of the Plant CRK Superfamily Are Capable of Trans- and Autophosphorylation of Tyrosine Residues. Nemoto K, et al. J Biol Chem, 2015 Jul 3. PMID 25969537, Free PMC Article
  2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_103846.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Calcium-dependent protein kinase (CDPK) family protein
NP_175381.1
  • Calcium-dependent protein kinase (CDPK) family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G19100.1); Has 118201 Blast hits to 116445 proteins in 3162 species: Archae - 162; Bacteria - 14319; Metazoa - 43815; Fungi - 12645; Plants - 25821; Viruses - 463; Other Eukaryotes - 20976 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    18351324..18354634
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_103846.4 → NP_175381.1  Calcium-dependent protein kinase (CDPK) family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_175381.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FX86
    UniProtKB/TrEMBL
    A0A178W6T2
    Conserved Domains (3) summary
    smart00220
    Location:151 → 412
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    COG5126
    Location:452 → 592
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
    cd05117
    Location:151 → 411
    STKc_CAMK; The catalytic domain of CAMK family Serine/Threonine Kinases
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FX86.1

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