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PLAC8 family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841326, updated on 18-Sep-2024

Summary

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Official Full Name
PLAC8 family protein
Primary source
TAIR:AT1G49030
Locus tag
AT1G49030
See related
Araport:AT1G49030
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F27J15.18; F27J15_18
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Genomic context

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Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_003070.9 (18136666..18138080)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene DPP6 N-terminal domain-like protein Neighboring gene tRNA-Asp Neighboring gene uncharacterized protein Neighboring gene stomatal cytokinesis defective / SCD1 protein (SCD1) Neighboring gene Eukaryotic aspartyl protease family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_103796.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
PLAC8 family protein
NP_175332.1
  • PLAC8 family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT3G18460.1); Has 749 Blast hits to 748 proteins in 94 species: Archae - 0; Bacteria - 0; Metazoa - 146; Fungi - 45; Plants - 538; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    18136666..18138080
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_103796.4 → NP_175332.1  PLAC8 family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_175332.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9M9A5
    UniProtKB/TrEMBL
    A0A5S9WNA9, A0A7G2E2X8
    Conserved Domains (1) summary
    TIGR01571
    Location:86 → 189
    A_thal_Cys_rich; uncharacterized Cys-rich domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9M9A5.1

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