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heat-inducible transcription repressor (DUF639) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841306, updated on 18-Sep-2024

Summary

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Official Full Name
heat-inducible transcription repressor (DUF639)
Primary source
TAIR:AT1G48840
Locus tag
AT1G48840
See related
Araport:AT1G48840
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T24P22.6; T24P22_6
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Genomic context

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Location:
chromosome: 1
Exon count:
11
Sequence:
Chromosome: 1; NC_003070.9 (18061356..18065031)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene Terpenoid cyclases/Protein prenyltransferases superfamily protein Neighboring gene Ribosomal protein S7e family protein Neighboring gene chorismate synthase, putative / 5-enolpyruvylshikimate-3-phosphate phospholyase Neighboring gene RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Neighboring gene Transducin/WD40 repeat-like superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_103778.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
heat-inducible transcription repressor (DUF639)
NP_175315.2
  • Plant protein of unknown function (DUF639); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF639 (InterPro:IPR006927); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF639) (TAIR:AT3G18350.1); Has 149 Blast hits to 146 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    18061356..18065031
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_103778.5 → NP_175315.2  heat-inducible transcription repressor (DUF639) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_175315.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WGN3, A0A7G2DWB0, Q8VXZ2
    Conserved Domains (1) summary
    pfam04842
    Location:455 → 680
    DUF639; Plant protein of unknown function (DUF639)
Nucleotide Protein
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