U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Auxin-responsive GH3 family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841288, updated on 18-Sep-2024

Summary

Official Full Name
Auxin-responsive GH3 family protein
Primary source
TAIR:AT1G48660
Locus tag
AT1G48660
See related
Araport:AT1G48660
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F11I4.15; F11I4_15
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_003070.9 (17995785..17998037, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene peroxin 3 Neighboring gene Transmembrane amino acid transporter family protein Neighboring gene DEA(D/H)-box RNA helicase family protein Neighboring gene auxin-responsive GH3 family protein Neighboring gene pseudo

General protein information

Preferred Names
Auxin-responsive GH3 family protein
NP_175299.1
  • Auxin-responsive GH3 family protein; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: auxin-responsive GH3 family protein (TAIR:AT1G48670.1); Has 1415 Blast hits to 1338 proteins in 229 species: Archae - 0; Bacteria - 452; Metazoa - 52; Fungi - 2; Plants - 674; Viruses - 0; Other Eukaryotes - 235 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    17995785..17998037 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001333346.1NP_001322825.1  Auxin-responsive GH3 family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AV88, A0A5S9WKL4, A0A654EHD3
  2. NM_103762.1NP_175299.1  Auxin-responsive GH3 family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_175299.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9WKL4, A0A654EHD3, Q9C735
    Conserved Domains (2) summary
    cl21606
    Location:7569
    PLN02247; indole-3-acetic acid-amido synthetase
    pfam03321
    Location:10550
    GH3; GH3 auxin-responsive promoter