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uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841240, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
TAIR:AT1G48200
Locus tag
AT1G48200
See related
Araport:AT1G48200
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F21D18.7; F21D18_7
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Genomic context

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Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_003070.9 (17796764..17798337, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene target of trans acting-siR480/255 protein Neighboring gene Galactose oxidase/kelch repeat superfamily protein Neighboring gene Zinc finger C-x8-C-x5-C-x3-H type family protein Neighboring gene Protein kinase superfamily protein Neighboring gene Protein kinase superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_103717.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in mitochondrion HDA PubMed 

General protein information

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Preferred Names
uncharacterized protein
NP_175254.2
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30 Blast hits to 30 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    17796764..17798337 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_103717.3 → NP_175254.2  uncharacterized protein AT1G48200 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_175254.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W2Y1, A0A5S9WMN4, Q6NPH1
Nucleotide Protein
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