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BGLU34 beta glucosidase 34 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841169, updated on 18-Sep-2024

Summary

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Official Symbol
BGLU34
Official Full Name
beta glucosidase 34
Primary source
TAIR:AT1G47600
Locus tag
AT1G47600
See related
Araport:AT1G47600
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
beta glucosidase 34; F16N3.11; F16N3_11; TGG4; THIOGLUCOSIDE GLUCOHYDROLASE 4
Summary
Encodes a myrosinase. Over-expression led to a glucosinolate profile change.
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Genomic context

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See BGLU34 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
13
Sequence:
Chromosome: 1; NC_003070.9 (17491731..17494779)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene miscRNA Neighboring gene purine permease 19 Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Functional genomic analysis of Arabidopsis thaliana glycoside hydrolase family 1. Xu Z, et al. Plant Mol Biol, 2004 May. PMID 15604686
  2. Myrosinases from root and leaves of Arabidopsis thaliana have different catalytic properties. Andersson D, et al. Phytochemistry, 2009 Jul-Aug. PMID 19703694
  3. A glucosinolate metabolism pathway in living plant cells mediates broad-spectrum antifungal defense. Bednarek P, et al. Science, 2009 Jan 2. PMID 19095900
  4. Advanced proteomic analyses yield a deep catalog of ubiquitylation targets in Arabidopsis. Kim DY, et al. Plant Cell, 2013 May. PMID 23667124, Free PMC Article
  5. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001198236.1
NM_103653.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables beta-glucosidase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
  
enables thioglucosidase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables thioglucosidase activity IEA
Inferred from Electronic Annotation
more info
  
enables thioglucosidase activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within glucosinolate metabolic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
beta glucosidase 34
NP_001185165.1
  • beta glucosidase 34 (BGLU34); FUNCTIONS IN: thioglucosidase activity, beta-glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: glucosinolate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 35 (TAIR:AT1G51470.1).
NP_175191.2
  • beta glucosidase 34 (BGLU34); FUNCTIONS IN: thioglucosidase activity, beta-glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: glucosinolate metabolic process, response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 35 (TAIR:AT1G51470.1); Has 11204 Blast hits to 10858 proteins in 1466 species: Archae - 142; Bacteria - 7723; Metazoa - 713; Fungi - 195; Plants - 1441; Viruses - 0; Other Eukaryotes - 990 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    17491731..17494779
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_103653.3 → NP_175191.2  beta glucosidase 34 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_175191.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8GRX1, Q9SX92
    UniProtKB/TrEMBL
    A0A5S9WMQ9
    Conserved Domains (1) summary
    cl23725
    Location:50 → 511
    Glyco_hydro_1; Glycosyl hydrolase family 1

  2. NM_001198236.1 → NP_001185165.1  beta glucosidase 34 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001185165.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W154, F4HV16
    Conserved Domains (1) summary
    cl23725
    Location:50 → 510
    Glyco_hydro_1; Glycosyl hydrolase family 1
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8GRX1.1

Gene LinkOut

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