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hypothetical protein (Protein of unknown function, DUF601) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841116, updated on 18-Sep-2024

Summary

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Official Full Name
hypothetical protein (Protein of unknown function, DUF601)
Primary source
TAIR:AT1G46696
Locus tag
AT1G46696
See related
Araport:AT1G46696
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F2G19.33; F2G19_33
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Genomic context

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Location:
chromosome: 1
Exon count:
6
Sequence:
Chromosome: 1; NC_003070.9 (17261860..17264183, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene uncharacterized protein Neighboring gene F-box family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_103606.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
hypothetical protein (Protein of unknown function, DUF601)
NP_175146.1
  • Protein of unknown function, DUF601; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF601 (InterPro:IPR006736); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF601 (TAIR:AT2G15110.1); Has 2393 Blast hits to 1960 proteins in 383 species: Archae - 25; Bacteria - 366; Metazoa - 883; Fungi - 248; Plants - 130; Viruses - 13; Other Eukaryotes - 728 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    17261860..17264183 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_103606.1 → NP_175146.1  hypothetical protein (Protein of unknown function, DUF601) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_175146.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9WJQ0, Q9C631
    Conserved Domains (1) summary
    pfam04642
    Location:201 → 502
    DUF601; Protein of unknown function, DUF601
Nucleotide Protein
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