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SIAR1 nodulin MtN21 /EamA-like transporter family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841044, updated on 18-Sep-2024

Summary

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Official Symbol
SIAR1
Official Full Name
nodulin MtN21 /EamA-like transporter family protein
Primary source
TAIR:AT1G44800
Locus tag
AT1G44800
See related
Araport:AT1G44800
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
Siliques Are Red 1; T12C22.7; T12C22_7; UMAMIT18; Usually multiple acids move in and out Transporters 18
Summary
Encodes Siliques Are Red 1 (SIAR1). Functions as a bidirectional amino acid transporter that is crucial for the amino acid homeostasis of siliques. Member of nodulin MtN21-like transporter family.
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Genomic context

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See SIAR1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Sequence:
Chromosome: 1; NC_003070.9 (16913994..16917053, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene elongation factor Neighboring gene translation initiation factor Neighboring gene ChaC-like family protein Neighboring gene DNA-binding storekeeper protein-related transcriptional regulator Neighboring gene Peptidase M20/M25/M40 family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Siliques are Red1 from Arabidopsis acts as a bidirectional amino acid transporter that is crucial for the amino acid homeostasis of siliques. Ladwig F, et al. Plant Physiol, 2012 Apr. PMID 22312005, Free PMC Article
  2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. SIAR1-mediated export of amino acids plays an important role in organic nitrogen allocation and particularly in amino acid homeostasis in developing siliques.[SIAR1]
    Title: Siliques are Red1 from Arabidopsis acts as a bidirectional amino acid transporter that is crucial for the amino acid homeostasis of siliques.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_103561.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables L-amino acid efflux transmembrane transporter activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables amino acid transmembrane transporter activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within amino acid export across plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within amino acid import IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within amino acid transport IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within intracellular amino acid homeostasis IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
nodulin MtN21 /EamA-like transporter family protein
NP_175101.1
  • nodulin MtN21 /EamA-like transporter family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT4G08300.1); Has 4156 Blast hits to 4146 proteins in 764 species: Archae - 34; Bacteria - 2214; Metazoa - 4; Fungi - 0; Plants - 1218; Viruses - 0; Other Eukaryotes - 686 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    16913994..16917053 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_103561.4 → NP_175101.1  nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_175101.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8LEI9, Q9LPF1
    UniProtKB/TrEMBL
    A0A178W1N5, A0A5S9WMJ8
    Conserved Domains (1) summary
    PLN00411
    Location:14 → 333
    PLN00411; nodulin MtN21 family protein; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LPF1.1

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