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elongation factor [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841041, updated on 18-Sep-2024

Summary

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Official Full Name
elongation factor
Primary source
TAIR:AT1G44770
Locus tag
AT1G44770
See related
Araport:AT1G44770
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T12C22.4; T12C22_4
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Genomic context

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Location:
chromosome: 1
Exon count:
6
Sequence:
Chromosome: 1; NC_003070.9 (16907537..16909572, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene purine permease 11 Neighboring gene Adenine nucleotide alpha hydrolases-like superfamily protein Neighboring gene translation initiation factor Neighboring gene ChaC-like family protein Neighboring gene nodulin MtN21 /EamA-like transporter family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_001123965.1
NM_103558.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
elongation factor
NP_001117437.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49710.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_175098.1
  • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49710.3); Has 81 Blast hits to 81 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    16907537..16909572 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_103558.4 → NP_175098.1  elongation factor [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_175098.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9WMH5, A0A654EG01, Q84WK2

  2. NM_001123965.1 → NP_001117437.1  elongation factor [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001117437.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A7G2DZ98, B3H607
Nucleotide Protein
Heading Accession and Version

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