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GA20OX5 gibberellin 20-oxidase 5 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841012, updated on 18-Sep-2024

Summary

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Official Symbol
GA20OX5
Official Full Name
gibberellin 20-oxidase 5
Primary source
TAIR:AT1G44090
Locus tag
AT1G44090
See related
Araport:AT1G44090
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 5; ATGA20OX5; gibberellin 20-oxidase 5; T7O23.20; T7O23_20
Summary
Encodes a gibberellin 20-oxidase.
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Genomic context

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See GA20OX5 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_003070.9 (16760616..16762486, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene glycine-rich protein Neighboring gene amino acid permease 5 Neighboring gene ncRNA Neighboring gene Cyclin A1;1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The gibberellin biosynthetic genes AtGA20ox1 and AtGA20ox2 act, partially redundantly, to promote growth and development throughout the Arabidopsis life cycle. Rieu I, et al. Plant J, 2008 Feb. PMID 18069939
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables gibberellin 20-oxidase activity TAS
Traceable Author Statement
more info
 PubMed 
Process Evidence Code Pubs
involved_in gibberellin biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within gibberellin biosynthetic process TAS
Traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
gibberellin 20-oxidase 5
NP_175075.1
  • gibberellin 20-oxidase 5 (GA20OX5); CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 20-oxidase 3 (TAIR:AT5G07200.1); Has 8296 Blast hits to 8263 proteins in 963 species: Archae - 0; Bacteria - 1043; Metazoa - 120; Fungi - 995; Plants - 4852; Viruses - 0; Other Eukaryotes - 1286 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    16760616..16762486 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_103535.2 → NP_175075.1  gibberellin 20-oxidase 5 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_175075.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q4PT02, Q9C6Y1, Q9LNY5
    UniProtKB/TrEMBL
    A0A178WC38, A0A5S9WK03
    Conserved Domains (3) summary
    PLN02276
    Location:24 → 383
    PLN02276; gibberellin 20-oxidase
    pfam03171
    Location:228 → 324
    2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily
    pfam14226
    Location:63 → 160
    DIOX_N; non-haem dioxygenase in morphine synthesis N-terminal
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q4PT02.1

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