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TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 840405, updated on 18-Sep-2024

Summary

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Official Full Name
TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
Primary source
TAIR:AT1G35180
Locus tag
AT1G35180
See related
Araport:AT1G35180
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T32G9.28; T32G9_28
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Genomic context

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Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_003070.9 (12877107..12878835, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene GF14 protein phi chain Neighboring gene TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein Neighboring gene uncharacterized protein Neighboring gene zinc finger, C3HC4 type (RING finger) protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_103215.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
NP_174751.2
  • TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: TRAM/LAG1/CLN8 homology domain (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (TAIR:AT1G35170.1); Has 191 Blast hits to 191 proteins in 65 species: Archae - 0; Bacteria - 0; Metazoa - 59; Fungi - 8; Plants - 76; Viruses - 3; Other Eukaryotes - 45 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    12877107..12878835 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_103215.5 → NP_174751.2  TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_174751.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q0WR38, Q6IDJ6
    Conserved Domains (1) summary
    smart00724
    Location:32 → 220
    TLC; TRAM, LAG1 and CLN8 homology domains
Nucleotide Protein
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