U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PHI-1 Phosphate-responsive 1 family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 840399, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
PHI-1
Official Full Name
Phosphate-responsive 1 family protein
Primary source
TAIR:AT1G35140
Locus tag
AT1G35140
See related
Araport:AT1G35140
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
EXL1; EXL7; EXORDIUM like 1; EXORDIUM LIKE 7; PHOSPHATE-INDUCED 1; T32G9.32; T32G9_32
Summary
EXL1 is involved in the C-starvation response. Phenotypic changes of an exl1 loss of function mutant became evident only under corresponding experimental conditions. For example, the mutant showed diminished biomass production in a short-day/low light growth regime, impaired survival during extended night, and impaired survival of anoxia stress.
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PHI-1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_003070.9 (12851983..12853235)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pseudo Neighboring gene pseudo Neighboring gene pseudo

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Expression pattern and putative function of EXL1 and homologous genes in Arabidopsis. Schröder F, et al. Plant Signal Behav, 2012 Jan. PMID 22301961, Free PMC Article
  2. Integrative Analysis from the Epigenome to Translatome Uncovers Patterns of Dominant Nuclear Regulation during Transient Stress. Lee TA, et al. Plant Cell, 2019 Nov. PMID 31519798, Free PMC Article
  3. Arabidopsis cell wall proteome defined using multidimensional protein identification technology. Bayer EM, et al. Proteomics, 2006 Jan. PMID 16287169
  4. Isolation and proteomic characterization of the Arabidopsis Golgi defines functional and novel components involved in plant cell wall biosynthesis. Parsons HT, et al. Plant Physiol, 2012 May. PMID 22430844, Free PMC Article
  5. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help
NM_103210.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within cellular response to hypoxia HEP PubMed 
acts_upstream_of_or_within response to hypoxia IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus HDA PubMed 
located_in extracellular region ISM
Inferred from Sequence Model
more info
  
located_in plant-type cell wall HDA PubMed 

General protein information

Go to the top of the page Help
Preferred Names
Phosphate-responsive 1 family protein
NP_174746.1
  • PHOSPHATE-INDUCED 1 (PHI-1); CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: Phosphate-responsive 1 family protein (TAIR:AT4G08950.1); Has 400 Blast hits to 400 proteins in 24 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 398; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    12851983..12853235
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_103210.4 → NP_174746.1  Phosphate-responsive 1 family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_174746.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9C6E4, Q9FPI9
    UniProtKB/TrEMBL
    A0A178WBW6, A0A5S9WLT6, A0A7G2DVB0
    Conserved Domains (1) summary
    pfam04674
    Location:41 → 308
    Phi_1; Phosphate-induced protein 1 conserved region
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9C6E4.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools