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Essential protein Yae1, N-terminal [ Arabidopsis thaliana (thale cress) ]

Gene ID: 840360, updated on 18-Sep-2024

Summary

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Official Full Name
Essential protein Yae1, N-terminal
Primary source
TAIR:AT1G34570
Locus tag
AT1G34570
See related
Araport:AT1G34570
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F12K21.27
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Genomic context

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Location:
chromosome: 1
Exon count:
5
Sequence:
Chromosome: 1; NC_003070.9 (12654927..12656605, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene transmembrane protein (DUF616) Neighboring gene hypothetical protein (DUF1184) Neighboring gene FAD-binding Berberine family protein Neighboring gene Major facilitator superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_103180.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Essential protein Yae1, N-terminal
NP_564448.1
  • Essential protein Yae1, N-terminal; CONTAINS InterPro DOMAIN/s: Essential protein Yae1, N-terminal (InterPro:IPR019191); BEST Arabidopsis thaliana protein match is: Essential protein Yae1, N-terminal (TAIR:AT3G15750.1); Has 136 Blast hits to 136 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 55; Fungi - 17; Plants - 55; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    12654927..12656605 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_103180.3 → NP_564448.1  Essential protein Yae1, N-terminal [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564448.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9WLR6, F4HV08
    Conserved Domains (1) summary
    pfam09811
    Location:68 → 105
    Yae1_N; Essential protein Yae1, N terminal
Nucleotide Protein
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