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CYCB1;5 CYCLIN B1;5 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 840348, updated on 18-Sep-2024

Summary

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Official Symbol
CYCB1;5
Official Full Name
CYCLIN B1;5
Primary source
TAIR:AT1G34460
Locus tag
AT1G34460
See related
Araport:AT1G34460
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
CYC3; CYCLIN 3; CYCLIN B1;5; F12K21.22; F12K21_22
Summary
B1 type cyclin
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Genomic context

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See CYCB1;5 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
15
Sequence:
Chromosome: 1; NC_003070.9 (12595110..12602379)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene leucine-rich repeat transmembrane protein kinase family protein Neighboring gene 2-oxoacid dehydrogenases acyltransferase family protein Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene miscRNA Neighboring gene ncRNA Neighboring gene magnesium transporter, putative (DUF803)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
CYCLIN B1;5
NP_001319145.1
  • CYCLIN B1;5 (CYCB1;5); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT5G06150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_001319146.1
  • CYCLIN B1;5 (CYCB1;5); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671); BEST Arabidopsis thaliana protein match is: Cyclin family protein (TAIR:AT5G06150.1).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    12595110..12602379
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001333104.1 → NP_001319145.1  CYCLIN B1;5 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4HUZ7, Q39072, Q9LNK6

  2. NM_001333105.1 → NP_001319146.1  CYCLIN B1;5 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4HUZ8

  3. NM_001333106.1 → NP_001320186.1  CYCLIN B1;5 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4HUZ7, Q39072, Q9LNK6

  4. NM_001333108.1 → NP_001320187.1  CYCLIN B1;5 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AM20

  5. NM_001333107.1 → NP_001320188.1  CYCLIN B1;5 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4HUZ8

  6. NM_001333109.1 → NP_001320190.1  CYCLIN B1;5 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4HUZ7, Q39072, Q9LNK6

  7. NM_103168.4 → NP_564446.3  CYCLIN B1;5 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564446.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4HUZ7, Q39072, Q9LNK6
    Conserved Domains (2) summary
    COG5024
    Location:116 → 400
    COG5024; Cyclin [Cell division and chromosome partitioning]
    pfam00134
    Location:275 → 380
    Cyclin_N; Cyclin, N-terminal domain

  8. NM_001333111.1 → NP_001320191.1  CYCLIN B1;5 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AM26

  9. NM_001333110.1 → NP_001320189.1  CYCLIN B1;5 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AM15
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q39072.3

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