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Glyceraldehyde-3-phosphate dehydrogenase-like family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 840319, updated on 18-Sep-2024

Summary

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Official Full Name
Glyceraldehyde-3-phosphate dehydrogenase-like family protein
Primary source
TAIR:AT1G34200
Locus tag
AT1G34200
See related
Araport:AT1G34200
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F23M19.12; F23M19_12
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Genomic context

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Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_003070.9 (12455653..12457547)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene NAC domain containing protein 16 Neighboring gene NAC domain containing protein 17 Neighboring gene somatic embryogenesis receptor-like kinase 2 Neighboring gene Regulator of Vps4 activity in the MVB pathway protein Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_103143.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Glyceraldehyde-3-phosphate dehydrogenase-like family protein
NP_564441.1
  • Glyceraldehyde-3-phosphate dehydrogenase-like family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase, N-terminal (InterPro:IPR000683), Oxidoreductase, C-terminal (InterPro:IPR004104), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: Oxidoreductase family protein (TAIR:AT4G09670.1); Has 11880 Blast hits to 11879 proteins in 1945 species: Archae - 244; Bacteria - 8550; Metazoa - 214; Fungi - 474; Plants - 94; Viruses - 0; Other Eukaryotes - 2304 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    12455653..12457547
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_103143.4 → NP_564441.1  Glyceraldehyde-3-phosphate dehydrogenase-like family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564441.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654EF93, Q9ASQ9
    Conserved Domains (2) summary
    COG0673
    Location:6 → 342
    MviM; Predicted dehydrogenase [General function prediction only]
    pfam01408
    Location:7 → 127
    GFO_IDH_MocA; Oxidoreductase family, NAD-binding Rossmann fold
Nucleotide Protein
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