U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

electron transporter, putative (DUF179) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 840269, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
electron transporter, putative (DUF179)
Primary source
TAIR:AT1G33780
Locus tag
AT1G33780
See related
Araport:AT1G33780
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F14M2.10; F14M2_10
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_003070.9 (12244560..12246231, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Terpenoid cyclases/Protein prenyltransferases superfamily protein Neighboring gene Integrase-type DNA-binding superfamily protein Neighboring gene Protein kinase superfamily protein Neighboring gene miscRNA Neighboring gene jacalin lectin family protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help
NM_103097.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
  
Component Evidence Code Pubs
located_in chloroplast HDA PubMed 
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in plastid stroma IDA
Inferred from Direct Assay
more info
  

General protein information

Go to the top of the page Help
Preferred Names
electron transporter, putative (DUF179)
NP_174638.2
  • Protein of unknown function (DUF179); LOCATED IN: chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF179 (InterPro:IPR003774); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF179) (TAIR:AT3G29240.2); Has 2552 Blast hits to 2552 proteins in 947 species: Archae - 0; Bacteria - 1880; Metazoa - 0; Fungi - 0; Plants - 126; Viruses - 0; Other Eukaryotes - 546 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    12244560..12246231 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_103097.4 → NP_174638.2  electron transporter, putative (DUF179) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_174638.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654EGQ3, Q8W467
    Conserved Domains (1) summary
    pfam02622
    Location:153 → 310
    DUF179; Uncharacterized ACR, COG1678
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools