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Transmembrane proteins 14C [ Arabidopsis thaliana (thale cress) ]

Gene ID: 840221, updated on 18-Sep-2024

Summary

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Official Full Name
Transmembrane proteins 14C
Primary source
TAIR:AT1G33265
Locus tag
AT1G33265
See related
Araport:AT1G33265
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_003070.9 (12066595..12068101)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene beta-1,3-n-acetylglucosaminyltransferase radical fringe protein, putative (DUF604) Neighboring gene Protein kinase superfamily protein Neighboring gene Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein Neighboring gene NAC domain containing protein 15 Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Two Plastid Fatty Acid Exporters Contribute to Seed Oil Accumulation in Arabidopsis. Li N, et al. Plant Physiol, 2020 Apr. PMID 32019874, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_103055.4

Gene Ontology Provided by TAIR

Process Evidence Code Pubs
acts_upstream_of_or_within embryo development ending in seed dormancy IGI
Inferred from Genetic Interaction
more info
 PubMed 
acts_upstream_of_or_within positive regulation of triglyceride transport IGI
Inferred from Genetic Interaction
more info
 PubMed 
acts_upstream_of_or_within positive regulation of triglyceride transport IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in chloroplast membrane IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
Transmembrane proteins 14C
NP_564422.1
  • Transmembrane proteins 14C; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0136, Transmembrane (InterPro:IPR005349); Has 188 Blast hits to 188 proteins in 62 species: Archae - 0; Bacteria - 34; Metazoa - 41; Fungi - 4; Plants - 100; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    12066595..12068101
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_103055.4 → NP_564422.1  Transmembrane proteins 14C [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564422.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    B3LFC0, Q3ED26, Q8LPG1, Q9C880
    UniProtKB/TrEMBL
    A0A178WC30, A0A5S9WLE9
    Conserved Domains (1) summary
    pfam03647
    Location:77 → 153
    Tmemb_14; Transmembrane proteins 14C
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8LPG1.1

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