U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PKp3 plastidial pyruvate kinase 3 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 840138, updated on 18-Sep-2024

Summary

Official Symbol
PKp3
Official Full Name
plastidial pyruvate kinase 3
Primary source
TAIR:AT1G32440
Locus tag
AT1G32440
See related
Araport:AT1G32440
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F5D14.22; F5D14_22; F5F19.10; F5F19_10; plastidial pyruvate kinase 3
Summary
encodes a chloroplast pyruvate kinase beta subunit. The enzyme is less active than the other chloroplast pyruvate kinase beta subunit encoded by AT5G52920. Involved in seed oil biosynthesis. Can partially complement the AT5G52920 mutant.
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See PKp3 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
12
Sequence:
Chromosome: 1; NC_003070.9 (11711944..11715162)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene nitrate transporter 1.5 Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene Single hybrid motif superfamily protein Neighboring gene isocitrate dehydrogenase IV

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

NM_102979.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables magnesium ion binding IDA
Inferred from Direct Assay
more info
PubMed 
enables potassium ion binding IDA
Inferred from Direct Assay
more info
PubMed 
enables pyruvate kinase activity IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within fatty acid biosynthetic process IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in glycolytic process IEA
Inferred from Electronic Annotation
more info
 
involved_in seed maturation ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
located_in chloroplast HDA PubMed 
located_in chloroplast ISM
Inferred from Sequence Model
more info
 
located_in chloroplast stroma IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
plastidial pyruvate kinase 3
NP_564402.1
  • plastidial pyruvate kinase 3 (PKp3); FUNCTIONS IN: pyruvate kinase activity; INVOLVED IN: glycolysis, fatty acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: plastidic pyruvate kinase beta subunit 1 (TAIR:AT5G52920.1); Has 10210 Blast hits to 10148 proteins in 2685 species: Archae - 173; Bacteria - 5966; Metazoa - 531; Fungi - 219; Plants - 532; Viruses - 0; Other Eukaryotes - 2789 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    11711944..11715162
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_102979.2NP_564402.1  plastidial pyruvate kinase 3 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564402.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q93Z53, Q9LQL3
    UniProtKB/TrEMBL
    A0A178W6P8, A0A5S9WI55
    Conserved Domains (1) summary
    PLN02623
    Location:3569
    PLN02623; pyruvate kinase