U.S. flag

An official website of the United States government

NHL8 NDR1/HIN1-like 8 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 840126, updated on 18-Sep-2024

Summary

Official Symbol
NHL8
Official Full Name
NDR1/HIN1-like 8
Primary source
TAIR:AT1G32340
Locus tag
AT1G32340
See related
Araport:AT1G32340
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F27G20.5; NDR1/HIN1-like 8
Summary
Encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression is not detected under normal conditions and in response to cucumber mosaic virus or spermine.
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See NHL8 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Sequence:
Chromosome: 1; NC_003070.9 (11663008..11666120, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene heat shock transcription factor A1D Neighboring gene uncharacterized protein Neighboring gene alternative oxidase 1D Neighboring gene miscRNA

General gene information

NM_102967.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ubiquitin-protein transferase activity  
enables zinc ion binding  
Component Evidence Code Pubs
located_in nucleus  

General protein information

Preferred Names
NDR1/HIN1-like 8
NP_174512.1
  • NDR1/HIN1-like 8 (NHL8); FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841), RWD (InterPro:IPR006575); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G14250.1); Has 3653 Blast hits to 3199 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 1736; Fungi - 604; Plants - 670; Viruses - 7; Other Eukaryotes - 636 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    11663008..11666120 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_102967.3NP_174512.1  NDR1/HIN1-like 8 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_174512.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W2B0, Q9LQM5
    Conserved Domains (4) summary
    smart00591
    Location:192323
    RWD; domain in RING finger and WD repeat containing proteins and DEXDc-like helicases subfamily related to the UBCc domain
    smart00647
    Location:446504
    IBR; In Between Ring fingers
    pfam01485
    Location:527582
    IBR; IBR domain, a half RING-finger domain
    cl17238
    Location:376427
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
External link. Please review our privacy policy.