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K-box region protein (DUF1985) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 840000, updated on 18-Sep-2024

Summary

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Official Full Name
K-box region protein (DUF1985)
Primary source
TAIR:AT1G31150
Locus tag
AT1G31150
See related
Araport:AT1G31150
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F28K20.8; F28K20_8
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Genomic context

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Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_003070.9 (11119827..11122675)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene polyadenylate-binding protein 1-B-binding protein Neighboring gene GORDITA Neighboring gene HISTIDINE TRIAD NUCLEOTIDE-BINDING 2 Neighboring gene F-box associated ubiquitination effector family protein Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001332944.1
NM_102853.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
K-box region protein (DUF1985)
NP_174400.1
  • FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1985 (InterPro:IPR015410), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF1985) (TAIR:AT1G36970.1); Has 361 Blast hits to 354 proteins in 51 species: Archae - 0; Bacteria - 2; Metazoa - 8; Fungi - 6; Plants - 334; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    11119827..11122675
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_102853.3 → NP_174400.1  K-box region protein (DUF1985) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_174400.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9WJB1, A0A654EED7, Q9SA08
    Conserved Domains (1) summary
    pfam09331
    Location:86 → 215
    DUF1985; Domain of unknown function (DUF1985)

  2. NM_001332944.1 → NP_001321227.1  K-box region protein (DUF1985) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AQ83, A0A654EED7
Nucleotide Protein
Heading Accession and Version

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