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E3 ubiquitin-protein ligase [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839728, updated on 18-Sep-2024

Summary

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Official Full Name
E3 ubiquitin-protein ligase
Primary source
TAIR:AT1G28327
Locus tag
AT1G28327
See related
Araport:AT1G28327
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F3H9.2; F3H9_2
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Genomic context

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Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_003070.9 (9931934..9933451)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene protease-like protein Neighboring gene pseudo Neighboring gene dormancy-associated protein-like 1 Neighboring gene miscRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_102598.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
E3 ubiquitin-protein ligase
NP_174154.2
  • unknown protein; Has 52 Blast hits to 52 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    9931934..9933451
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_102598.2 → NP_174154.2  E3 ubiquitin-protein ligase [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_174154.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W5U5, F4HWK6, Q5Q0F4
Nucleotide Protein
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