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Telomerase activating protein Est1 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839720, updated on 18-Sep-2024

Summary

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Official Full Name
Telomerase activating protein Est1
Primary source
TAIR:AT1G28260
Locus tag
AT1G28260
See related
Araport:AT1G28260
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F3H9.9; F3H9_9
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Genomic context

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Location:
chromosome: 1
Exon count:
6
Sequence:
Chromosome: 1; NC_003070.9 (9875527..9879433, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene purine permease 1 Neighboring gene strawberry notch protein (DUF616) Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene ralf-like 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_102591.5
NM_202198.2

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Telomerase activating protein Est1
NP_174147.1
  • Telomerase activating protein Est1; CONTAINS InterPro DOMAIN/s: Telomerase activating protein Est1 (InterPro:IPR019458); BEST Arabidopsis thaliana protein match is: Telomerase activating protein Est1 (TAIR:AT5G19400.2); Has 490 Blast hits to 489 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 280; Fungi - 120; Plants - 68; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).
NP_973927.1
  • Telomerase activating protein Est1; CONTAINS InterPro DOMAIN/s: Telomerase activating protein Est1 (InterPro:IPR019458); BEST Arabidopsis thaliana protein match is: Telomerase activating protein Est1 (TAIR:AT5G19400.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    9875527..9879433 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_202198.2 → NP_973927.1  Telomerase activating protein Est1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_973927.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q84WB4, Q9FZ99
    UniProtKB/TrEMBL
    A0A178WAP1
    Conserved Domains (2) summary
    pfam10373
    Location:164 → 471
    EST1_DNA_bind; Est1 DNA/RNA binding domain
    pfam10374
    Location:70 → 151
    EST1; Telomerase activating protein Est1

  2. NM_102591.5 → NP_174147.1  Telomerase activating protein Est1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_174147.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q84WB4, Q9FZ99
    UniProtKB/TrEMBL
    A0A178WAP1
    Conserved Domains (2) summary
    pfam10373
    Location:164 → 471
    EST1_DNA_bind; Est1 DNA/RNA binding domain
    pfam10374
    Location:70 → 151
    EST1; Telomerase activating protein Est1
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FZ99.1

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