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phosphoribosylformylglycinamidine synthase [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839628, updated on 18-Sep-2024

Summary

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Official Full Name
phosphoribosylformylglycinamidine synthase
Primary source
TAIR:AT1G27385
Locus tag
AT1G27385
See related
Araport:AT1G27385
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 1
Exon count:
8
Sequence:
Chromosome: 1; NC_003070.9 (9510475..9512971, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene squamosa promoter binding protein-like 10 Neighboring gene ROP-interactive CRIB motif-containing protein 2 Neighboring gene translocase outer membrane 20-2 Neighboring gene Ribosomal protein L22p/L17e family protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_001084137.1
NM_001160901.2
NM_001160902.1
NM_102501.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
phosphoribosylformylglycinamidine synthase
NP_001077606.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF493 (InterPro:IPR007454); Has 76 Blast hits to 76 proteins in 23 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
NP_001154373.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF493 (InterPro:IPR007454); Has 77 Blast hits to 77 proteins in 22 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
NP_001154374.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF493 (InterPro:IPR007454); Has 79 Blast hits to 79 proteins in 23 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
NP_564282.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF493 (InterPro:IPR007454); Has 76 Blast hits to 76 proteins in 23 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    9510475..9512971 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001160901.2 → NP_001154373.1  phosphoribosylformylglycinamidine synthase [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001154373.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4HSW1, Q0WQS3
    Conserved Domains (1) summary
    pfam04359
    Location:120 → 201
    DUF493; Protein of unknown function (DUF493)

  2. NM_001160902.1 → NP_001154374.1  phosphoribosylformylglycinamidine synthase [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001154374.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4HSW0
    Conserved Domains (1) summary
    pfam04359
    Location:119 → 200
    DUF493; Protein of unknown function (DUF493)

  3. NM_102501.3 → NP_564282.1  phosphoribosylformylglycinamidine synthase [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564282.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q0WQS3, Q9FZJ7
    Conserved Domains (1) summary
    pfam04359
    Location:119 → 202
    DUF493; Protein of unknown function (DUF493)

  4. NM_001084137.1 → NP_001077606.1  phosphoribosylformylglycinamidine synthase [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001077606.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A8MQS1, Q0WQS3
    Conserved Domains (1) summary
    pfam04359
    Location:119 → 200
    DUF493; Protein of unknown function (DUF493)
Nucleotide Protein
Heading Accession and Version

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