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Galactosyltransferase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839601, updated on 18-Sep-2024

Summary

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Official Full Name
Galactosyltransferase family protein
Primary source
TAIR:AT1G27120
Locus tag
AT1G27120
See related
Araport:AT1G27120
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T7N9.18; T7N9_18
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Genomic context

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Location:
chromosome: 1
Exon count:
7
Sequence:
Chromosome: 1; NC_003070.9 (9421009..9424084)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Actin cross-linking protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene ncRNA Neighboring gene glutathione S-transferase tau 13

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A small multigene hydroxyproline-O-galactosyltransferase family functions in arabinogalactan-protein glycosylation, growth and development in Arabidopsis. Basu D, et al. BMC Plant Biol, 2015 Dec 21. PMID 26690932, Free PMC Article
  2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001332746.1
NM_102474.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
  
enables glycosyltransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables hydroxyproline O-galactosyltransferase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in arabinogalactan protein metabolic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in protein O-linked glycosylation via hydroxyproline IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in Golgi apparatus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in Golgi apparatus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Galactosyltransferase family protein
NP_174032.2
  • Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT5G62620.1); Has 2356 Blast hits to 2323 proteins in 111 species: Archae - 0; Bacteria - 6; Metazoa - 1677; Fungi - 2; Plants - 620; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    9421009..9424084
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_102474.4 → NP_174032.2  Galactosyltransferase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_174032.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8GXG6, Q9LFX6, W8Q7B2
    UniProtKB/TrEMBL
    A0A178WH44, A0A5S9W4P5
    Conserved Domains (2) summary
    pfam00337
    Location:187 → 391
    Gal-bind_lectin; Galactoside-binding lectin
    cl21608
    Location:439 → 619
    Galactosyl_T; Galactosyltransferase

  2. NM_001332746.1 → NP_001322256.1  Galactosyltransferase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8ATG4, A0A7G2DW12
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8GXG6.2

Gene LinkOut

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