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ankyrin repeat family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839438, updated on 18-Sep-2024

Summary

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Official Full Name
ankyrin repeat family protein
Primary source
TAIR:AT1G03670
Locus tag
AT1G03670
See related
Araport:AT1G03670
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F21B7.27
Summary
Ankyrin repeat containing protein
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Genomic context

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Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_003070.9 (914222..916222, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Acyl-CoA N-acyltransferases (NAT) superfamily protein Neighboring gene Ankyrin-repeat containing protein Neighboring gene ncRNA Neighboring gene thioredoxin M-type 1 Neighboring gene DTW domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
ankyrin repeat family protein
NP_171863.1
  • ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT4G03500.1); Has 38664 Blast hits to 17395 proteins in 690 species: Archae - 39; Bacteria - 2692; Metazoa - 19825; Fungi - 3120; Plants - 3302; Viruses - 203; Other Eukaryotes - 9483 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    914222..916222 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100246.1 → NP_171863.1  ankyrin repeat family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_171863.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WD46, F4I2G1, Q9LR59
    Conserved Domains (4) summary
    COG0666
    Location:214 → 364
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:286 → 318
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:76 → 172
    Ank_2; Ankyrin repeats (3 copies)
    pfam13962
    Location:443 → 553
    PGG; Domain of unknown function
Nucleotide Protein
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