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Cystatin/monellin superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839427, updated on 18-Sep-2024

Summary

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Official Full Name
Cystatin/monellin superfamily protein
Primary source
TAIR:AT1G03710
Locus tag
AT1G03710
See related
Araport:AT1G03710
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F21B7.31
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Genomic context

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Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_003070.9 (923390..924730)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene DTW domain-containing protein Neighboring gene Uncharacterized protein family (UPF0497) Neighboring gene Cysteine proteinases superfamily protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_001123751.1
NM_100250.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Cystatin/monellin superfamily protein
NP_001117223.1
  • Cystatin/monellin superfamily protein; FUNCTIONS IN: cysteine-type endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I25, cystatin (InterPro:IPR000010), Proteinase inhibitor I25, cystatin, conserved region (InterPro:IPR020381), Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: Cystatin/monellin superfamily protein (TAIR:AT4G03565.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_171867.2
  • Cystatin/monellin superfamily protein; FUNCTIONS IN: cysteine-type endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I25, cystatin (InterPro:IPR000010), Proteinase inhibitor I25, cystatin, conserved region (InterPro:IPR020381), Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: Cystatin/monellin superfamily protein (TAIR:AT4G03565.1); Has 113 Blast hits to 103 proteins in 7 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 106; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    923390..924730
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100250.4 → NP_171867.2  Cystatin/monellin superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_171867.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W1P6, Q58G57, Q5Q0J0
    Conserved Domains (1) summary
    TIGR01638
    Location:109 → 198
    Atha_cystat_rel; Arabidopsis thaliana cystatin-related protein

  2. NM_001123751.1 → NP_001117223.1  Cystatin/monellin superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001117223.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W1P6, Q58G57, Q5Q0J0
    Conserved Domains (1) summary
    TIGR01638
    Location:109 → 198
    Atha_cystat_rel; Arabidopsis thaliana cystatin-related protein
Nucleotide Protein
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