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IQD18 IQ-domain 18 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839394, updated on 18-Sep-2024

Summary

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Official Symbol
IQD18
Official Full Name
IQ-domain 18
Primary source
TAIR:AT1G01110
Locus tag
AT1G01110
See related
Araport:AT1G01110
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
IQ-domain 18; T25K16.10; T25K16_10
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Genomic context

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See IQD18 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_003070.9 (51953..54737)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene pyruvate dehydrogenase E1 alpha Neighboring gene 60S acidic ribosomal protein family Neighboring gene 3-ketoacyl-CoA synthase 1 Neighboring gene CBL-interacting Serine/Threonine-kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001123732.2
NM_001331250.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
IQ-domain 18
NP_001117204.1
  • IQ-domain 18 (IQD18); FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 17 (TAIR:AT4G00820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_001318900.1
  • IQ-domain 18 (IQD18); FUNCTIONS IN: molecular_function unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: IQ-domain 17 (TAIR:AT4G00820.1); Has 1112 Blast hits to 678 proteins in 50 species: Archae - 0; Bacteria - 10; Metazoa - 109; Fungi - 16; Plants - 528; Viruses - 4; Other Eukaryotes - 445 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    51953..54737
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001123732.2 → NP_001117204.1  IQ-domain 18 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001117204.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    B3H705, Q8LEL3, Q9MAM4
    UniProtKB/TrEMBL
    A0A178W9B6, A0A178WBA3
    Conserved Domains (2) summary
    pfam13178
    Location:374 → 470
    DUF4005; Protein of unknown function (DUF4005)
    cd22307
    Location:93 → 173
    Adgb_C_mid-like; C-terminal middle region of Androglobins (Adgbs) and related proteins; including permuted globin domain and IQ motif

  2. NM_001331250.1 → NP_001318900.1  IQ-domain 18 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    B3H705
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9MAM4.1

Gene LinkOut

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