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GRXS13 Glutaredoxin family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839392, updated on 18-Sep-2024

Summary

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Official Symbol
GRXS13
Official Full Name
Glutaredoxin family protein
Primary source
TAIR:AT1G03850
Locus tag
AT1G03850
See related
Araport:AT1G03850
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATGRXS13; F21M11.22; F21M11_22; glutaredoxin 13
Summary
Encodes glutaredoxin ATGRXS13, required to facilitate Botrytis cinerea infection of Arabidopsis thaliana plants. Sylvain La Camera et al (2011, PMID:21756272) reported a third splice variant in addition to the two annotated in TAIR10.
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Genomic context

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See GRXS13 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_003070.9 (975871..977911, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene guanylate-binding family protein Neighboring gene C2H2 and C2HC zinc fingers superfamily protein Neighboring gene prohibitin 2 Neighboring gene FASCICLIN-like arabinoogalactan 9

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Glutaredoxin GRXS13 plays a key role in protection against photooxidative stress in Arabidopsis. Laporte D, et al. J Exp Bot, 2012 Jan. PMID 21963612, Free PMC Article
  2. The glutaredoxin ATGRXS13 is required to facilitate Botrytis cinerea infection of Arabidopsis thaliana plants. La Camera S, et al. Plant J, 2011 Nov. PMID 21756272
  3. Immediate-early and delayed cytokinin response genes of Arabidopsis thaliana identified by genome-wide expression profiling reveal novel cytokinin-sensitive processes and suggest cytokinin action through transcriptional cascades. Brenner WG, et al. Plant J, 2005 Oct. PMID 16212609
  4. Repression of the Arabidopsis thaliana jasmonic acid/ethylene-induced defense pathway by TGA-interacting glutaredoxins depends on their C-terminal ALWL motif. Zander M, et al. Mol Plant, 2012 Jul. PMID 22207719
  5. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_100265.3
NM_179255.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within defense response to fungus IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within negative regulation of transcription by RNA polymerase II IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within response to cytokinin IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within response to photooxidative stress IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Glutaredoxin family protein
NP_563691.1
  • Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: response to cytokinin stimulus; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G28480.1); Has 646 Blast hits to 646 proteins in 57 species: Archae - 0; Bacteria - 6; Metazoa - 30; Fungi - 15; Plants - 593; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
NP_849586.1
  • Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: response to cytokinin stimulus; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G28480.1); Has 446 Blast hits to 446 proteins in 30 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 5; Plants - 435; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    975871..977911 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001331442.1 → NP_001321276.1  Glutaredoxin family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AQF1
    Conserved Domains (1) summary
    cl00388
    Location:56 → 106
    Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold

  2. NM_179255.3 → NP_849586.1  Glutaredoxin family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_849586.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9SG84
    Conserved Domains (1) summary
    TIGR02189
    Location:56 → 136
    GlrX-like_plant; Glutaredoxin-like family

  3. NM_100265.3 → NP_563691.1  Glutaredoxin family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_563691.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    C1JGQ8, Q84TF4, Q94CA3, Q9ZWA7
    UniProtKB/TrEMBL
    A0A178W2Q3, A0A5S9SG84
    Conserved Domains (1) summary
    TIGR02189
    Location:56 → 150
    GlrX-like_plant; Glutaredoxin-like family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q84TF4.2

Gene LinkOut

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