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IAA10 indoleacetic acid-induced protein 10 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839290, updated on 18-Sep-2024

Summary

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Official Symbol
IAA10
Official Full Name
indoleacetic acid-induced protein 10
Primary source
TAIR:AT1G04100
Locus tag
AT1G04100
See related
Araport:AT1G04100
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AUXIN-INDUCED PROTEIN 10; F20D22.13; F20D22_13; indoleacetic acid-induced protein 10
Summary
Auxin induced gene, IAA10 (IAA10).
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Genomic context

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See IAA10 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_003070.9 (1059470..1061209)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene vacuolar sorting-associated protein (DUF946) Neighboring gene uncharacterized protein Neighboring gene Subtilase family protein Neighboring gene multidrug resistance-associated protein 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetics of Aux/IAA and ARF action in plant growth and development. Liscum E, et al. Plant Mol Biol, 2002 Jun-Jul. PMID 12036262
  2. Protein-protein interaction and gene co-expression maps of ARFs and Aux/IAAs in Arabidopsis. Piya S, et al. Front Plant Sci, 2014. PMID 25566309, Free PMC Article
  3. The auxin signalling network translates dynamic input into robust patterning at the shoot apex. Vernoux T, et al. Mol Syst Biol, 2011 Jul 5. PMID 21734647, Free PMC Article
  4. Transcriptional Regulation of Arabidopsis Polycomb Repressive Complex 2 Coordinates Cell-Type Proliferation and Differentiation. de Lucas M, et al. Plant Cell, 2016 Oct. PMID 27650334, Free PMC Article
  5. A user-friendly platform for yeast two-hybrid library screening using next generation sequencing. Erffelinck ML, et al. PLoS One, 2018. PMID 30576311, Free PMC Article

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_100291.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables DNA-binding transcription factor activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables identical protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables transcription cis-regulatory region binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within response to auxin TAS
Traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
indoleacetic acid-induced protein 10
NP_171906.1
  • indoleacetic acid-induced protein 10 (IAA10); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to chitin; LOCATED IN: nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 11 (TAIR:AT4G28640.3); Has 1513 Blast hits to 1512 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1512; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    1059470..1061209
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100291.3 → NP_171906.1  indoleacetic acid-induced protein 10 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_171906.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q38828
    UniProtKB/TrEMBL
    A0A178W8Y8, A0A5S9SIC3, A0A654E7N6
    Conserved Domains (1) summary
    pfam02309
    Location:42 → 256
    AUX_IAA; AUX/IAA family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q38828.1

Gene LinkOut

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