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ADF11 actin depolymerizing factor 11 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839281, updated on 18-Sep-2024

Summary

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Official Symbol
ADF11
Official Full Name
actin depolymerizing factor 11
Primary source
TAIR:AT1G01750
Locus tag
AT1G01750
See related
Araport:AT1G01750
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
actin depolymerizing factor 11; T1N6.16; T1N6_16
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Genomic context

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See ADF11 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_003070.9 (275188..276310)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene adenylosuccinate synthetase Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene kinase with tetratricopeptide repeat domain-containing protein Neighboring gene ncRNA Neighboring gene denosine deaminases acting on tRNA Neighboring gene ncRNA Neighboring gene propionyl-CoA carboxylase Neighboring gene GATA type zinc finger transcription factor family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Plant Actin-Depolymerizing Factors Possess Opposing Biochemical Properties Arising from Key Amino Acid Changes throughout Evolution. Nan Q, et al. Plant Cell, 2017 Feb. PMID 28123105, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001331303.1
NM_100058.2

Gene Ontology Provided by TAIR

Process Evidence Code Pubs
acts_upstream_of_or_within actin filament depolymerization IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in actin filament depolymerization IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
  
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
actin depolymerizing factor 11
NP_171680.1
  • actin depolymerizing factor 11 (ADF11); FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Actin-binding, cofilin/tropomyosin type (InterPro:IPR002108); BEST Arabidopsis thaliana protein match is: actin depolymerizing factor 8 (TAIR:AT4G00680.1); Has 1654 Blast hits to 1631 proteins in 274 species: Archae - 0; Bacteria - 5; Metazoa - 781; Fungi - 163; Plants - 515; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    275188..276310
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100058.2 → NP_171680.1  actin depolymerizing factor 11 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_171680.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LQ81
    UniProtKB/TrEMBL
    A0A178WJX4, A0A178WLU6, A0A5S9S4M6
    Conserved Domains (1) summary
    cl15697
    Location:4 → 137
    ADF_gelsolin; Actin depolymerization factor/cofilin- and gelsolin-like domains

  2. NM_001331303.1 → NP_001320442.1  actin depolymerizing factor 11 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WLU6, A0A1P8AMT9
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LQ81.1

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