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Transmembrane protein 97, Putative [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839261, updated on 18-Sep-2024

Summary

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Official Full Name
Transmembrane protein 97, Putative
Primary source
TAIR:AT1G05210
Locus tag
AT1G05210
See related
Araport:AT1G05210
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
YUP8H12.18; YUP8H12_18
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Genomic context

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Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_003070.9 (1510404..1511683)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene glutamate receptor 3.4 Neighboring gene ncRNA Neighboring gene hexokinase-1 protein Neighboring gene ncRNA Neighboring gene Transmembrane protein 97, Putative Neighboring gene ncRNA Neighboring gene homeodomain GLABROUS 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_100400.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Transmembrane protein 97, Putative
NP_563731.1
  • Transmembrane protein 97, predicted; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane protein 97, predicted (InterPro:IPR016964); BEST Arabidopsis thaliana protein match is: Transmembrane protein 97, predicted (TAIR:AT2G32380.1); Has 151 Blast hits to 151 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 54; Fungi - 14; Plants - 77; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    1510404..1511683
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100400.4 → NP_563731.1  Transmembrane protein 97, Putative [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_563731.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W8R1, O23047
    Conserved Domains (1) summary
    pfam10914
    Location:11 → 145
    DUF2781; Protein of unknown function (DUF2781)
Nucleotide Protein
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