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BSK4 kinase with tetratricopeptide repeat domain-containing protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839253, updated on 18-Sep-2024

Summary

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Official Symbol
BSK4
Official Full Name
kinase with tetratricopeptide repeat domain-containing protein
Primary source
TAIR:AT1G01740
Locus tag
AT1G01740
See related
Araport:AT1G01740
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
brassinosteroid-signaling kinase 4; T1N6.15; T1N6_15
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Genomic context

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See BSK4 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
10
Sequence:
Chromosome: 1; NC_003070.9 (272111..274930, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene NAC (No Apical Meristem) domain transcriptional regulator superfamily protein Neighboring gene adenylosuccinate synthetase Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene actin depolymerizing factor 11 Neighboring gene denosine deaminases acting on tRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. BSKs are partially redundant positive regulators of brassinosteroid signaling in Arabidopsis. Sreeramulu S, et al. Plant J, 2013 Jun. PMID 23496207
  2. A brassinosteroid-signaling kinase interacts with multiple receptor-like kinases in Arabidopsis. Xu P, et al. Mol Plant, 2014 Feb. PMID 24051702, Free PMC Article
  3. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
  4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in brassinosteroid mediated signaling pathway IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region HDA PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
kinase with tetratricopeptide repeat domain-containing protein
NP_001184886.1
  • Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: BR-signaling kinase 3 (TAIR:AT4G00710.1).
NP_171679.1
  • Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: protein serine/threonine kinase activity, binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: BR-signaling kinase 3 (TAIR:AT4G00710.1); Has 33834 Blast hits to 33303 proteins in 1392 species: Archae - 10; Bacteria - 2383; Metazoa - 7709; Fungi - 204; Plants - 21978; Viruses - 102; Other Eukaryotes - 1448 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    272111..274930 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001331300.1 → NP_001322177.1  kinase with tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AT62, A0A5S9S398

  2. NM_001197957.2 → NP_001184886.1  kinase with tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001184886.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4HU55, Q9LQ82
    UniProtKB/TrEMBL
    A0A178WDH9, A0A5S9S398, A0A654E827
    Conserved Domains (3) summary
    PLN03088
    Location:380 → 473
    PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
    sd00006
    Location:379 → 403
    TPR; TPR repeat [structural motif]
    cl21453
    Location:70 → 310
    PKc_like; Protein Kinases, catalytic domain

  3. NM_001331301.1 → NP_001322178.1  kinase with tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AT62, A0A5S9S398

  4. NM_001331302.1 → NP_001322176.1  kinase with tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WBE7, A0A1P8AT60, A0A384K8P4, A0A7G2DRP6

  5. NM_100057.2 → NP_171679.1  kinase with tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_171679.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4HU55, Q9LQ82
    UniProtKB/TrEMBL
    A0A178WDH9, A0A5S9S398, A0A654E827
    Conserved Domains (3) summary
    PLN03088
    Location:380 → 473
    PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
    sd00006
    Location:379 → 403
    TPR; TPR repeat [structural motif]
    cl21453
    Location:70 → 310
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
F4HU55.1

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