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C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839249, updated on 18-Sep-2024

Summary

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Official Full Name
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Primary source
TAIR:AT1G04150
Locus tag
AT1G04150
See related
Araport:AT1G04150
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F20D22.8; F20D22_8
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Genomic context

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Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_003070.9 (1081024..1084431, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene Transducin family protein / WD-40 repeat family protein Neighboring gene myosin XI B Neighboring gene eukaryotic translation initiation factor 2 gamma subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of Multiple C2 Domain and Transmembrane Region Proteins in Arabidopsis. Liu L, et al. Plant Physiol, 2018 Mar. PMID 29259105, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_100296.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
colocalizes_with endoplasmic reticulum IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
NP_171911.1
  • C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT4G11610.1); Has 3504 Blast hits to 2915 proteins in 204 species: Archae - 0; Bacteria - 2; Metazoa - 2158; Fungi - 82; Plants - 979; Viruses - 2; Other Eukaryotes - 281 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    1081024..1084431 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100296.2 → NP_171911.1  C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_171911.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O64492
    UniProtKB/TrEMBL
    A0A178WEY7, A0A5S9SHH6, A0A654E6L5
    Conserved Domains (5) summary
    cd04019
    Location:435 → 591
    C2C_MCTP_PRT_plant; C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset
    cd04022
    Location:12 → 138
    C2A_MCTP_PRT_plant; C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset
    cd08378
    Location:280 → 398
    C2B_MCTP_PRT_plant; C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset
    cd08379
    Location:603 → 729
    C2D_MCTP_PRT_plant; C2 domain fourth repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset
    pfam08372
    Location:863 → 1012
    PRT_C; Plant phosphoribosyltransferase C-terminal
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O64492.1

Gene LinkOut

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