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EIF2 GAMMA eukaryotic translation initiation factor 2 gamma subunit [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839238, updated on 18-Sep-2024

Summary

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Official Symbol
EIF2 GAMMA
Official Full Name
eukaryotic translation initiation factor 2 gamma subunit
Primary source
TAIR:AT1G04170
Locus tag
AT1G04170
See related
Araport:AT1G04170
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
eukaryotic translation initiation factor 2 gamma subunit; F20D22.6; F20D22_6
Summary
protein synthesis initiation factor eIF2 gamma
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Genomic context

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See EIF2 GAMMA in Genome Data Viewer
Location:
chromosome: 1
Exon count:
9
Sequence:
Chromosome: 1; NC_003070.9 (1096882..1099901)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene C2 calcium/lipid-binding plant phosphoribosyltransferase family protein Neighboring gene myosin XI B Neighboring gene YUCCA 9 Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. VH1/BRL2 receptor-like kinase interacts with vascular-specific adaptor proteins VIT and VIK to influence leaf venation. Ceserani T, et al. Plant J, 2009 Mar. PMID 19000166, Free PMC Article
  2. Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase. Van Leene J, et al. Nat Plants, 2019 Mar. PMID 30833711
  3. Interactomics of Qa-SNARE in Arabidopsis thaliana. Fujiwara M, et al. Plant Cell Physiol, 2014 Apr. PMID 24556609
  4. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
  5. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_100298.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
  
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
  
enables translation initiation factor activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in extracellular region HDA PubMed 

General protein information

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Preferred Names
eukaryotic translation initiation factor 2 gamma subunit
NP_171913.1
  • eukaryotic translation initiation factor 2 gamma subunit (EIF2 GAMMA); CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Initiation factor eIF2 gamma, C-terminal (InterPro:IPR015256), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1A/initiation factor IF2gamma family protein (TAIR:AT4G18330.2); Has 29259 Blast hits to 29225 proteins in 6532 species: Archae - 651; Bacteria - 17093; Metazoa - 4832; Fungi - 574; Plants - 965; Viruses - 0; Other Eukaryotes - 5144 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    1096882..1099901
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001331466.1 → NP_001320247.1  eukaryotic translation initiation factor 2 gamma subunit [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WKN5, A0A384KBB6, O64490, Q8LAP5
    Conserved Domains (1) summary
    PTZ00327
    Location:3 → 463
    PTZ00327; eukaryotic translation initiation factor 2 gamma subunit; Provisional

  2. NM_100298.3 → NP_171913.1  eukaryotic translation initiation factor 2 gamma subunit [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_171913.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WKN5, A0A384KBB6, O64490, Q8LAP5
    Conserved Domains (1) summary
    PTZ00327
    Location:3 → 463
    PTZ00327; eukaryotic translation initiation factor 2 gamma subunit; Provisional
Nucleotide Protein
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