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hypothetical protein (DUF1639) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839122, updated on 18-Sep-2024

Summary

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Official Full Name
hypothetical protein (DUF1639)
Primary source
TAIR:AT1G25370
Locus tag
AT1G25370
See related
Araport:AT1G25370
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F4F7.1
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Genomic context

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Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_003070.9 (8897564..8899111, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene Metallo-hydrolase/oxidoreductase superfamily protein Neighboring gene NAD+ transporter 2 Neighboring gene Protein kinase superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_001332676.1
NM_102347.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
hypothetical protein (DUF1639)
NP_564231.1
  • Protein of unknown function (DUF1639); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1639 (InterPro:IPR012438); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1639) (TAIR:AT1G68340.1); Has 265 Blast hits to 265 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 264; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    8897564..8899111 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_102347.3 → NP_564231.1  hypothetical protein (DUF1639) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564231.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W4M8, A0A384L7R1, A0A5S9VUQ0, Q8LFI6
    Conserved Domains (1) summary
    pfam07797
    Location:210 → 259
    DUF1639; Protein of unknown function (DUF1639)

  2. NM_001332676.1 → NP_001322174.1  hypothetical protein (DUF1639) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W4M8, A0A384L7R1, A0A5S9VUQ0, Q8LFI6
    Conserved Domains (1) summary
    pfam07797
    Location:210 → 259
    DUF1639; Protein of unknown function (DUF1639)
Nucleotide Protein
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