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CYP86C1 cytochrome P450, family 86, subfamily C, polypeptide 1 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839069, updated on 18-Sep-2024

Summary

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Official Symbol
CYP86C1
Official Full Name
cytochrome P450, family 86, subfamily C, polypeptide 1
Primary source
TAIR:AT1G24540
Locus tag
AT1G24540
See related
Araport:AT1G24540
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
''cytochrome P450; cytochrome P450; F21J9.20; family 86; polypeptide 1; polypeptide 1''; subfamily C
Summary
member of CYP86C
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Genomic context

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See CYP86C1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_003070.9 (8699650..8701458)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene homolog of Brassica campestris pollen protein 1 Neighboring gene Transducin/WD40 repeat-like superfamily protein Neighboring gene copine family protein Neighboring gene paramyosin Neighboring gene transmembrane protein, putative (DUF707)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_102298.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
  
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
  
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
cytochrome P450, family 86, subfamily C, polypeptide 1
NP_173862.1
  • ''cytochrome P450, family 86, subfamily C, polypeptide 1'' (CYP86C1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: petal, embryo, sepal, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 86, subfamily C, polypeptide 2 (TAIR:AT3G26125.1); Has 29011 Blast hits to 28908 proteins in 1488 species: Archae - 44; Bacteria - 2527; Metazoa - 10901; Fungi - 6353; Plants - 8121; Viruses - 3; Other Eukaryotes - 1062 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    8699650..8701458
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_102298.3 → NP_173862.1  cytochrome P450, family 86, subfamily C, polypeptide 1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_173862.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654ECS1, Q9FYL0
    Conserved Domains (1) summary
    cl12078
    Location:90 → 520
    p450; Cytochrome P450
Nucleotide Protein
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